Not wanting to sound like a prick, but it sounds like you've got a lot to learn and we cant teach you everything you need to know in this thread. Sounds like you need to do a LOT of research. Use the search button and read through all the posts in this forum and you'll pick up 99% of what you need to know.
Here's a link to how turbos work:
http://auto.howstuffworks.com/turbo.htm
tuning = adjusting the amount of fuel that gets squirted into the engine and when, adjusting the ignition timing how much and when
S-AFC - Apexi's little piggyback for tuning Air/Fuel
E-Manage - Greddy's more advanced piggyback for tuning air/fuel and also timing if im not mistaken
JWT ECU - Send your ECU off with your car's specs and they'll change the ROM info to work with your injectors/fuel pressure, MAFS
Detonation - What happens when an engine isnt tuned right. Nothing more than an annoying sound from the engine...letting you know its on the virge of blowing up.