Someone misinformed you, the gen1 Rogues and Rogue Selects don't have smart charging. The Blue wire on the connector is for the generator warning lamp, the Pink one is the 12V supply for the field coils. The alternator won't put out meaningful current without juice to the fields, and your low voltage in operation indicates it's either that or a bum alternator. The fields are fed from fuse #32 in the underhood fuse box (the fuse box, not the IPDM). It's connected to battery, so use a test lamp to check it, not a pull-and-looksee. If both sides are dead there's a problem upstream, if one side lights then the fuse is blown, if both sides light then the fuse is good and has power so you probably have a bad alternator.