I don't think you can. Of course a lot would depend on what you mean by Low Cost. As the ex owner of a TV and stereo shop and a music listener for years ( Ihave a Tuner/preamp/amp that are restored Marantz classic from the 70s,and their source is an IMac running iTunes for everyday music and a VPT Scout TT all feeding into Martin Logan ESL speakers.) The turntable cost me $1600 without a cartridge, that was another $1600. All I am trying to say is that I know a little bit about sound.
This Bose system is not a very high end offering. But it is still a premium system.
On a premium system like this, it CAN be improved, but not on the cheap.
Here is a review of the top systems in cars... The Levinson is the best I personally have heard and is superior to the Bose.
But don't lose track of the point that the Bose is AT LEAST a mid range system and you don't improve mid range systems with cheap components.
http://www.edmunds.com/car-technology/c ... d-off.html
Bottom line go to settings and make the Bose sound the best it can for your ears....or take $3000/10,000 down to a high level car audio shop.