As you see there are 4 bolts on the rear flange so you can index the rear section for minimal runout..........selecting the center spacing washer thickness [none, 1 or 2] takes additional time.
The swaping is the easy part, the fine tuning takes days to find the absolute best position//center angle at what ever speed you want to optimize.
You really need a vibration freq/amplitude analyser as human are not good at low frequency amplitude discrimination [ telling a 10% change].
The above is almost never done except new at the factory as the time required is massive.
Don't forget to change the rear transmission shaft seal and check the diff flange for trueness [runout].
Bad shafts tend to turn other attached things bad.
http://cgi.ebay.com/ws/eBayISA...=1504Kent Moore Electronic Vibration Analyzer EVA2 J-38792A ~~$400
http://cgi.ebay.com/ws/eBayISA...=1504
http://cgi.ebay.com/ws/eBayISA...=4678
Always lots of inexpensive old but working vibration analysers on EBAY!
Nice to have something battery operated........IRD is a good choice as is Vitec. The Kent Moore is what dealers have and use ....maybe?.......it shows the 3 highest vibration frequencies and each's amplitude.