Wow, I am sorry to hear that happened to you.
I had something similar happen and my auto insurance wouldn't cover the stolen items, however my comprehensive did replace the glass. This was not on my Rogue though. Now I make sure to bring my GPS and other electronics inside with me every time I leave the car. It's a pain, but it's too expensive to replace those items.
Smash and grab thefts are quickly on the rise due to GPS/Navigation devices and of course iPods/Satellite Radios. I saw on a show once that they will even smash-n-grab even if they just see the suction cup mark on your windshield from your GPS or other electronic device. They assume that the equipment is in your glove box or center storage compartment. So you just can't win
I hope they quickly get your Rogue to feeling brand new. They are great vehicles and after three months, I still love mine