"Potential" is irrelevant. I could change the cam and do some headwork on a SOHC and decimate the flow of a DOHC. Of course you can do the same with the DE but the difference will be closer and you'll spend more money on the DE for simply paying more for it, plus the extra cam and valves.
No one is really taking these engines to their potential (highest possible output), so that has no bearing at all on which you should choose. More than likely, you'll be doing simple mods or have modest expectations for a turbo kit in which case the DOHC would be somewhat easier for you because of the availability of *more* kits for it so you have more choices.
Now if you were just planning to be the typical Honda turned Nissan JDM fanboy and immediately planning on having daddy pay for your phat SR20 swap and S15 conversion, grab an 89-90 because they can be had considerably cheaper and the only thing you'll need for the swap is the power steering from a 91-94 and the tach.
I've rambled and it's dinner time, cya
