Cleaning the MAF harness conections seems to have done the trick. The engine doesn't bog anymore.

Happy days are here again. However, there is one curious thing occuring now.
Today was windy and rainy in Chicago land. The J is motoring along nicely with the engine still idling low but I figure I'll let the ECU relearn for a couple of days and failing that disconnect the battery for 15 minutes to reset the the ECU to the default factory settings (if that doesn't work, I'll adjust the idle screw). The windows start foggong up so I switch on the defrost button to clear the windshield. I come to a stop at the next light and notice that the engine is idling at a perfect 650 rpm. "Nice", I think to myself, "The ECU is learning very quickly." The by the time I get to the next light the windows are clear so as I sit there I switch off the derfrost. The rpm drops back down to ~450! "Hmmm", I think, "The AC must be sending a signal to the ECU to keep the rpms up. Interesting."
I normally drive around with the climate control in "Econ" mode. To test what is going on, I leave the temperature at the same setting but switch to "Auto" mode. The AC shouldn't be activated becuase the temperture outside is low enough that the heater will be going not the AC. The J is idling at 650. I turn switch to "Econ" and the rpm drops to 450 again. "Very curious.", I say to myself. Hit Auto again and the rpm goes back to 650. Weird.

I'll leave it like this for a couple of days and see what the ECU comes up with.