This topic has been covered before. So a full answer can be achieved through some searching.
For a quick fix...
The intake manifolds between the two do not interchange, unless making a custom adapter to suit.
The most common and pain free way of dealing with getting your intake manifold out of your way is to go with a Greddy unit,
http://shop.rawbrokerage.com/p...Id=53
The exhaust manifolds or turbo manifolds can be adapted with either using an adapter or by modifying two of the 6 exhaust port flanges to suit the bolt configuration differences.
Valve covers swap over, however, to achieve the proper fitment of the front timing belt cover you'll need to swap the rear timing belt cover. (RB26 Valve covers will not work with a stock RB25 intake manifold, unless modifying it)
There are many parts that can interchange to achieve different results such as using RB26 parts to stroke your RB25 to a 2.7L. Timing belts are the same between the engines along with a few other bits. Fuel rails will need modifying, but there are fuel rails for RB25's. etc etc etc.
Hope that gets you on the right track for searching..
Good Luck